IL_9SRO_137

3D structure

PDB id

9SRO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRO|1|a|U|1851
9SRO|1|a|U|1852
9SRO|1|a|A|1853
9SRO|1|a|A|1854
9SRO|1|a|U|1855
9SRO|1|a|U|1856
9SRO|1|a|G|1857
9SRO|1|a|A|1858
9SRO|1|a|U|1859
9SRO|1|a|G|1860
*
9SRO|1|a|U|1882
9SRO|1|a|U|1883
9SRO|1|a|G|1884
9SRO|1|a|A|1885
9SRO|1|a|U|1886
9SRO|1|a|C|1887
9SRO|1|a|G|1888
9SRO|1|a|A|1889
9SRO|1|a|A|1890
9SRO|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA