IL_9SS1_034

3D structure

PDB id

9SS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit RimM-KO with IF1 and IF3 (State II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGAAUU*AGGAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SS1|1|D1|A|673
9SS1|1|D1|G|674
9SS1|1|D1|A|675
9SS1|1|D1|A|676
9SS1|1|D1|U|677
9SS1|1|D1|U|678
*
9SS1|1|D1|A|712
9SS1|1|D1|G|713
9SS1|1|D1|G|714
9SS1|1|D1|A|715
9SS1|1|D1|A|716
9SS1|1|D1|U|717

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AE

Small ribosomal subunit protein bS6, fully modified isoform

Chain AJ

Small ribosomal subunit protein uS11

Chain AQ

Small ribosomal subunit protein bS18

Chain AT

Small ribosomal subunit protein bS21