IL_9SS1_046

3D structure

PDB id

9SS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit RimM-KO with IF1 and IF3 (State II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUGCCAGC*GGGAACUC

Length

17 nucleotides

Bulged bases

9SS1|1|D1|U|1126

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SS1|1|D1|G|1124
9SS1|1|D1|U|1125
9SS1|1|D1|U|1126
9SS1|1|D1|G|1127
9SS1|1|D1|C|1128
9SS1|1|D1|C|1129
9SS1|1|D1|A|1130
9SS1|1|D1|G|1131
9SS1|1|D1|C|1132
*
9SS1|1|D1|G|1142
9SS1|1|D1|G|1143
9SS1|1|D1|G|1144
9SS1|1|D1|A|1145
9SS1|1|D1|A|1146
9SS1|1|D1|C|1147
9SS1|1|D1|U|1148
9SS1|1|D1|C|1149

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AH

Small ribosomal subunit protein uS9