IL_9SS2_044

3D structure

PDB id

9SS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit RimM-KO with IF1 and IF3 (State III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9SS2_044 not in the Motif Atlas

Geometric match to IL_8OI5_088

Geometric discrepancy: 0.2683

The information below is about IL_8OI5_088

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

9SS2|1|D1|C|998
9SS2|1|D1|C|999
*
9SS2|1|D1|G|1041
9SS2|1|D1|A|1042
9SS2|1|D1|G|1043

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains