IL_9SS2_045

3D structure

PDB id

9SS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit RimM-KO with IF1 and IF3 (State III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

9SS2|1|D1|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SS2|1|D1|G|1003
9SS2|1|D1|A|1004
9SS2|1|D1|A|1005
9SS2|1|D1|G|1006
*
9SS2|1|D1|U|1023
9SS2|1|D1|G|1024
9SS2|1|D1|U|1025
9SS2|1|D1|G|1026
9SS2|1|D1|C|1027
9SS2|1|D1|C|1028
9SS2|1|D1|U|1029
9SS2|1|D1|U|1030
9SS2|1|D1|C|1031
9SS2|1|D1|G|1032
9SS2|1|D1|G|1033
9SS2|1|D1|G|1034
9SS2|1|D1|A|1035
9SS2|1|D1|A|1036
9SS2|1|D1|C|1037

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AM

Small ribosomal subunit protein uS14