IL_9SS6_149

3D structure

PDB id

9SS6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from RimM-KO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCUUG*UAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SS6|1|D2|C|2103
9SS6|1|D2|C|2104
9SS6|1|D2|U|2105
9SS6|1|D2|U|2106
9SS6|1|D2|G|2107
*
9SS6|1|D2|U|2182
9SS6|1|D2|A|2183
9SS6|1|D2|A|2184
9SS6|1|D2|U|2185
9SS6|1|D2|G|2186

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BA

Large ribosomal subunit protein uL1

Chain BI

Large ribosomal subunit protein bL9