IL_9SX2_044

3D structure

PDB id

9SX2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S Doxycycline Bound E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.08 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

9SX2|1|A|U|1030, 9SX2|1|A|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SX2|1|A|G|1003
9SX2|1|A|A|1004
9SX2|1|A|A|1005
9SX2|1|A|G|1006
*
9SX2|1|A|U|1023
9SX2|1|A|G|1024
9SX2|1|A|U|1025
9SX2|1|A|G|1026
9SX2|1|A|C|1027
9SX2|1|A|C|1028
9SX2|1|A|U|1029
9SX2|1|A|U|1030
9SX2|1|A|C|1031
9SX2|1|A|G|1032
9SX2|1|A|G|1033
9SX2|1|A|G|1034
9SX2|1|A|A|1035
9SX2|1|A|A|1036
9SX2|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

Small ribosomal subunit protein uS3

Chain N

Small ribosomal subunit protein uS14