3D structure

PDB id
9SYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome from deltaRlmE strain
Experimental method
ELECTRON MICROSCOPY
Resolution
1.89 Å

Loop

Sequence
AGAAU*GGAAU
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9SYH|1|A|A|673
9SYH|1|A|G|674
9SYH|1|A|A|675
9SYH|1|A|A|676
9SYH|1|A|U|677
*
9SYH|1|A|G|713
9SYH|1|A|G|714
9SYH|1|A|A|715
9SYH|1|A|A|716
9SYH|1|A|U|717

Current chains

Chain A
16S rRNA

Nearby chains

Chain F
Small ribosomal subunit protein bS6, fully modified isoform
Chain K
Small ribosomal subunit protein uS11
Chain R
Small ribosomal subunit protein bS18
Chain U
Small ribosomal subunit protein bS21
Chain c
Large ribosomal subunit protein uL2

Coloring options:

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