IL_9T5X_056

3D structure

PDB id

9T5X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

9T5X|1|A|C|1400, 9T5X|1|A|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9T5X_056 not in the Motif Atlas

Homologous match to IL_6CZR_165

Geometric discrepancy: 0.1576

The information below is about IL_6CZR_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

9T5X|1|A|C|1399
9T5X|1|A|C|1400
9T5X|1|A|G|1401
*
9T5X|1|A|C|1501
9T5X|1|A|A|1502
9T5X|1|A|A|1503
9T5X|1|A|G|1504

Current chains

Chain A

16S rRNA

Nearby chains

Chain X

mRNA

Chain Z

Transfer RNA; tRNA