IL_9T5X_109
3D structure
- PDB id
- 9T5X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- CCAAC*GGG
- Length
- 8 nucleotides
- Bulged bases
- 9T5X|1|a|G|1332
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T5X_109 not in the Motif Atlas
- Homologous match to IL_7A0S_047
- Geometric discrepancy: 0.2308
- The information below is about IL_7A0S_047
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.3
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
9T5X|1|a|C|1319
9T5X|1|a|C|1320
9T5X|1|a|A|1321
9T5X|1|a|A|1322
9T5X|1|a|C|1323
*
9T5X|1|a|G|1331
9T5X|1|a|G|1332
9T5X|1|a|G|1333
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 6
- Protein translocase subunit SecY
- Chain V
- NADH-quinone oxidoreductase subunit K
- Chain r
- Large ribosomal subunit protein uL22
Coloring options: