IL_9T61_056

3D structure

PDB id

9T61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Doxycycline Bound C. burnetii 30S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GUACAAAG*CAGAAAAC

Length

16 nucleotides

Bulged bases

9T61|1|A|G|1283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T61|1|A|G|1243
9T61|1|A|U|1244
9T61|1|A|A|1245
9T61|1|A|C|1246
9T61|1|A|A|1247
9T61|1|A|A|1248
9T61|1|A|A|1249
9T61|1|A|G|1250
*
9T61|1|A|C|1281
9T61|1|A|A|1282
9T61|1|A|G|1283
9T61|1|A|A|1284
9T61|1|A|A|1285
9T61|1|A|A|1286
9T61|1|A|A|1287
9T61|1|A|C|1288

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain I

Small ribosomal subunit protein uS9

Chain J

Small ribosomal subunit protein uS10

Chain N

Small ribosomal subunit protein uS14