IL_9T7H_031
3D structure
- PDB id
- 9T7H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- CGCAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T7H_031 not in the Motif Atlas
- Homologous match to IL_4V9F_022
- Geometric discrepancy: 0.1202
- The information below is about IL_4V9F_022
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.3
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9T7H|1|1|C|855
9T7H|1|1|G|856
9T7H|1|1|C|857
9T7H|1|1|A|858
9T7H|1|1|G|859
*
9T7H|1|1|U|877
9T7H|1|1|G|878
9T7H|1|1|A|879
9T7H|1|1|G|880
9T7H|1|1|G|881
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain BP
- Large ribosomal subunit protein eL18
Coloring options: