IL_9T7H_128

3D structure

PDB id

9T7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GUGGCAG*CGGUAAUAC

Length

16 nucleotides

Bulged bases

9T7H|1|2|A|498, 9T7H|1|2|U|500, 9T7H|1|2|A|501

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T7H|1|2|G|481
9T7H|1|2|U|482
9T7H|1|2|G|483
9T7H|1|2|G|484
9T7H|1|2|C|485
9T7H|1|2|A|486
9T7H|1|2|G|487
*
9T7H|1|2|C|494
9T7H|1|2|G|495
9T7H|1|2|G|496
9T7H|1|2|U|497
9T7H|1|2|A|498
9T7H|1|2|A|499
9T7H|1|2|U|500
9T7H|1|2|A|501
9T7H|1|2|C|502

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AN

30S ribosomal protein S12

Chain AZ

30S ribosomal protein S3

Chain H

Dehydrogenase