IL_9T7H_136

3D structure

PDB id

9T7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GGGAGAGG*CUGGAAC

Length

15 nucleotides

Bulged bases

9T7H|1|2|A|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T7H|1|2|G|627
9T7H|1|2|G|628
9T7H|1|2|G|629
9T7H|1|2|A|630
9T7H|1|2|G|631
9T7H|1|2|A|632
9T7H|1|2|G|633
9T7H|1|2|G|634
*
9T7H|1|2|C|706
9T7H|1|2|U|707
9T7H|1|2|G|708
9T7H|1|2|G|709
9T7H|1|2|A|710
9T7H|1|2|A|711
9T7H|1|2|C|712

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AA

30S ribosomal protein S3Ae

Chain AQ

30S ribosomal protein S15

Chain AW

30S ribosomal protein S27e