IL_9T7H_161

3D structure

PDB id

9T7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

G(OMC)CC*G(UR3)A(6MZ)C

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC, UR3, 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T7H|1|2|G|1375
9T7H|1|2|OMC|1376
9T7H|1|2|C|1377
9T7H|1|2|C|1378
*
9T7H|1|2|G|1466
9T7H|1|2|UR3|1467
9T7H|1|2|A|1468
9T7H|1|2|6MZ|1469
9T7H|1|2|C|1470

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain A0

Small ribosomal subunit protein eS32

Chain H

Dehydrogenase