IL_9TEW_006

3D structure

PDB id

9TEW (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDro bound to the initiating Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGG*CGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TEW_006 not in the Motif Atlas

Geometric match to IL_8B0X_006

Geometric discrepancy: 0.0599

The information below is about IL_8B0X_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05502.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

9

Unit IDs

9TEW|1|A|C|67
9TEW|1|A|G|68
9TEW|1|A|G|69
*
9TEW|1|A|C|99
9TEW|1|A|G|100
9TEW|1|A|A|101
9TEW|1|A|G|102

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20