IL_9TEX_083

3D structure

PDB id

9TEX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dal2 bound to the Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TEX_083 not in the Motif Atlas

Geometric match to IL_8B0X_083

Geometric discrepancy: 0.0491

The information below is about IL_8B0X_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9TEX|1|a|U|703
9TEX|1|a|G|704
9TEX|1|a|A|705
9TEX|1|a|A|706
9TEX|1|a|G|707
*
9TEX|1|a|U|724
9TEX|1|a|G|725
9TEX|1|a|G|726
9TEX|1|a|A|727
9TEX|1|a|G|728

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2