IL_9TEX_119

3D structure

PDB id

9TEX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dal2 bound to the Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TEX_119 not in the Motif Atlas

Homologous match to IL_7A0S_056

Geometric discrepancy: 0.5357

The information below is about IL_7A0S_056

Detailed Annotation

Double sheared with near cWW

Broad Annotation

Double sheared

Motif group

IL_87767.3

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

18

Unit IDs

9TEX|1|a|U|1474
9TEX|1|a|G|1475
9TEX|1|a|U|1476
9TEX|1|a|A|1477
9TEX|1|a|G|1478
*
9TEX|1|a|U|1513
9TEX|1|a|G|1514
9TEX|1|a|A|1515
9TEX|1|a|G|1516
9TEX|1|a|G|1517

Current chains

Chain a

23S rRNA

Nearby chains