IL_9TEY_071
3D structure
- PDB id
- 9TEY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDro bound to the terminating Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CCAGUAG*CGAACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TEY_071 not in the Motif Atlas
- Geometric match to IL_8B0X_071
- Geometric discrepancy: 0.045
- The information below is about IL_8B0X_071
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
9TEY|1|V|C|239
9TEY|1|V|C|240
9TEY|1|V|A|241
9TEY|1|V|G|242
9TEY|1|V|U|243
9TEY|1|V|A|244
9TEY|1|V|G|245
*
9TEY|1|V|C|253
9TEY|1|V|G|254
9TEY|1|V|A|255
9TEY|1|V|A|256
9TEY|1|V|C|257
9TEY|1|V|G|258
Current chains
- Chain V
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain k
- 50S ribosomal protein L15
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