IL_9TEZ_039
3D structure
- PDB id
- 9TEZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDroS bound to the Escherichia coli 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- GAAG*CGGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TEZ_039 not in the Motif Atlas
- Geometric match to IL_9H3G_114
- Geometric discrepancy: 0.1213
- The information below is about IL_9H3G_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
9TEZ|1|V|G|1038
9TEZ|1|V|A|1039
9TEZ|1|V|A|1040
9TEZ|1|V|G|1041
*
9TEZ|1|V|C|1114
9TEZ|1|V|G|1115
9TEZ|1|V|G|1116
9TEZ|1|V|C|1117
Current chains
- Chain V
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36A
- Chain g
- Large ribosomal subunit protein uL6
- Chain l
- Large ribosomal subunit protein uL16
- Chain u
- 50S ribosomal protein L25
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