IL_9TEZ_091
3D structure
- PDB id
- 9TEZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDroS bound to the Escherichia coli 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 9TEZ|1|V|G|2576, 9TEZ|1|V|A|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TEZ_091 not in the Motif Atlas
- Homologous match to IL_7A0S_089
- Geometric discrepancy: 0.1434
- The information below is about IL_7A0S_089
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.5
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
9TEZ|1|V|C|2510
9TEZ|1|V|U|2511
9TEZ|1|V|C|2512
*
9TEZ|1|V|G|2574
9TEZ|1|V|C|2575
9TEZ|1|V|G|2576
9TEZ|1|V|A|2577
9TEZ|1|V|G|2578
Current chains
- Chain V
- 23S rRNA
Nearby chains
- Chain 8
- DalDroS
- Chain W
- Peptide chain release factor RF1
- Chain d
- Large ribosomal subunit protein uL3
- Chain z
- Large ribosomal subunit protein bL32
Coloring options: