IL_9TI5_059

3D structure

PDB id

9TI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UG*CGUUAAG

Length

9 nucleotides

Bulged bases

9TI5|1|A|U|1552

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI5_059 not in the Motif Atlas

Geometric match to IL_9DFE_060

Geometric discrepancy: 0.2799

The information below is about IL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46086.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

9TI5|1|A|U|1525
9TI5|1|A|G|1526
*
9TI5|1|A|C|1549
9TI5|1|A|G|1550
9TI5|1|A|U|1551
9TI5|1|A|U|1552
9TI5|1|A|A|1553
9TI5|1|A|A|1554
9TI5|1|A|G|1555

Current chains

Chain A

23S rRNA

Nearby chains