IL_9TI5_108
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGUCACA*UUAAGC
- Length
- 13 nucleotides
- Bulged bases
- 9TI5|1|B|U|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI5_108 not in the Motif Atlas
- Geometric match to IL_9E6Q_106
- Geometric discrepancy: 0.2759
- The information below is about IL_9E6Q_106
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_41504.2
- Basepair signature
- cWW-L-cSW-L-cSW-L-cSH-L-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
9TI5|1|B|G|21
9TI5|1|B|G|22
9TI5|1|B|U|23
9TI5|1|B|C|24
9TI5|1|B|A|25
9TI5|1|B|C|26
9TI5|1|B|A|27
*
9TI5|1|B|U|53
9TI5|1|B|U|54
9TI5|1|B|A|55
9TI5|1|B|A|56
9TI5|1|B|G|57
9TI5|1|B|C|58
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain J
- 50S ribosomal protein L5
- Chain R
- 50S ribosomal protein L18
Coloring options: