IL_9TI6_066
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI6_066 not in the Motif Atlas
- Geometric match to IL_8B0X_180
- Geometric discrepancy: 0.0418
- The information below is about IL_8B0X_180
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.3
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
9TI6|1|A|G|1710
9TI6|1|A|G|1711
9TI6|1|A|A|1712
9TI6|1|A|A|1713
9TI6|1|A|C|1714
9TI6|1|A|U|1715
9TI6|1|A|C|1716
9TI6|1|A|G|1717
9TI6|1|A|G|1718
*
9TI6|1|A|C|2017
9TI6|1|A|U|2018
9TI6|1|A|G|2019
9TI6|1|A|U|2020
9TI6|1|A|C|2021
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L14
Coloring options: