IL_9TI7_110
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GAG*UGAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI7_110 not in the Motif Atlas
- Homologous match to IL_7A0S_100
- Geometric discrepancy: 0.2701
- The information below is about IL_7A0S_100
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_05502.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
9TI7|1|A|G|2863
9TI7|1|A|A|2864
9TI7|1|A|G|2865
*
9TI7|1|A|U|2891
9TI7|1|A|G|2892
9TI7|1|A|A|2893
9TI7|1|A|C|2894
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain Q
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L19
Coloring options: