IL_9TI7_147
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI7_147 not in the Motif Atlas
- Homologous match to IL_6CZR_409
- Geometric discrepancy: 0.1535
- The information below is about IL_6CZR_409
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
9TI7|1|a|G|681
9TI7|1|a|G|682
9TI7|1|a|A|683
9TI7|1|a|A|684
9TI7|1|a|U|685
*
9TI7|1|a|G|721
9TI7|1|a|G|722
9TI7|1|a|A|723
9TI7|1|a|A|724
9TI7|1|a|C|725
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
- Chain g
- 30S ribosomal protein S6
- Chain l
- 30S ribosomal protein S11
- Chain s
- 30S ribosomal protein S18
Coloring options: