IL_9TI7_149
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI7_149 not in the Motif Atlas
- Geometric match to IL_8GLP_241
- Geometric discrepancy: 0.1359
- The information below is about IL_8GLP_241
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31690.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9TI7|1|a|G|782
9TI7|1|a|G|783
9TI7|1|a|G|784
9TI7|1|a|A|785
9TI7|1|a|U|786
9TI7|1|a|C|787
*
9TI7|1|a|G|811
9TI7|1|a|U|812
9TI7|1|a|C|813
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain G
- 50S ribosomal protein L2
- Chain l
- 30S ribosomal protein S11
Coloring options: