IL_9TI7_176
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UAAC*GGGA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI7_176 not in the Motif Atlas
- Geometric match to IL_8B0X_103
- Geometric discrepancy: 0.1817
- The information below is about IL_8B0X_103
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
9TI7|1|a|U|1434
9TI7|1|a|A|1435
9TI7|1|a|A|1436
9TI7|1|a|C|1437
*
9TI7|1|a|G|1484
9TI7|1|a|G|1485
9TI7|1|a|G|1486
9TI7|1|a|A|1487
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- 50S ribosomal protein L14
- Chain m
- 30S ribosomal protein S12
Coloring options: