IL_9TI8_010

3D structure

PDB id

9TI8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.18 Å

Loop

Sequence

AC*GGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI8_010 not in the Motif Atlas

Geometric match to IL_8B0X_135

Geometric discrepancy: 0.2273

The information below is about IL_8B0X_135

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73108.4

Basepair signature

cWW-cWS-cSH-cWW

Number of instances in this motif group

25

Unit IDs

9TI8|1|A|A|305
9TI8|1|A|C|306
*
9TI8|1|A|G|409
9TI8|1|A|G|410
9TI8|1|A|A|411
9TI8|1|A|U|412

Current chains

Chain A

23S rRNA

Nearby chains