IL_9TI9_177

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

UAAC*GAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI9_177 not in the Motif Atlas

Geometric match to IL_4WF9_107

Geometric discrepancy: 0.3559

The information below is about IL_4WF9_107

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05502.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

9

Unit IDs

9TI9|1|a|U|1455
9TI9|1|a|A|1456
9TI9|1|a|A|1457
9TI9|1|a|C|1458
*
9TI9|1|a|G|1466
9TI9|1|a|A|1467
9TI9|1|a|G|1468

Current chains

Chain a

16S rRNA

Nearby chains

Chain u

30S ribosomal protein S20