3D structure

PDB id
9TKN (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S pre-initiation complex with IF2 and IF1 bound (30S PIC-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
UAGAG*UGGA
Length
9 nucleotides
Bulged bases
9TKN|1|D1|A|665
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TKN|1|D1|U|662
9TKN|1|D1|A|663
9TKN|1|D1|G|664
9TKN|1|D1|A|665
9TKN|1|D1|G|666
*
9TKN|1|D1|U|740
9TKN|1|D1|G|741
9TKN|1|D1|G|742
9TKN|1|D1|A|743

Current chains

Chain D1
16S Ribosomal RNA

Nearby chains

Chain AE
Small ribosomal subunit protein bS6, fully modified isoform
Chain AN
Small ribosomal subunit protein uS15
Chain AQ
Small ribosomal subunit protein bS18

Coloring options:

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