IL_9TKN_035

3D structure

PDB id

9TKN (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S pre-initiation complex with IF2 and IF1 bound (30S PIC-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

9TKN|1|D1|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKN|1|D1|U|684
9TKN|1|D1|G|685
9TKN|1|D1|U|686
9TKN|1|D1|A|687
9TKN|1|D1|G|688
*
9TKN|1|D1|C|699
9TKN|1|D1|G|700
9TKN|1|D1|U|701
9TKN|1|D1|A|702
9TKN|1|D1|G|703
9TKN|1|D1|A|704
9TKN|1|D1|G|705
9TKN|1|D1|A|706

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AJ

Small ribosomal subunit protein uS11