3D structure

PDB id
9TKP (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S Initiation Complex with extended IF2 bound (70S IC-I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AGAAUU*AGGAAU
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TKP|1|D1|A|673
9TKP|1|D1|G|674
9TKP|1|D1|A|675
9TKP|1|D1|A|676
9TKP|1|D1|U|677
9TKP|1|D1|U|678
*
9TKP|1|D1|A|712
9TKP|1|D1|G|713
9TKP|1|D1|G|714
9TKP|1|D1|A|715
9TKP|1|D1|A|716
9TKP|1|D1|U|717

Current chains

Chain D1
16S Ribosomal RNA

Nearby chains

Chain AE
Small ribosomal subunit protein bS6, fully modified isoform
Chain AJ
Small ribosomal subunit protein uS11
Chain AQ
Small ribosomal subunit protein bS18
Chain AU
Small ribosomal subunit protein bS21
Chain BB
Large ribosomal subunit protein uL2

Coloring options:

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