3D structure

PDB id
9TKP (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S Initiation Complex with extended IF2 bound (70S IC-I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAAC*GAGUGAAAAAGAAC
Length
18 nucleotides
Bulged bases
9TKP|1|D2|A|504, 9TKP|1|D2|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TKP|1|D2|G|481
9TKP|1|D2|A|482
9TKP|1|D2|A|483
9TKP|1|D2|C|484
*
9TKP|1|D2|G|496
9TKP|1|D2|A|497
9TKP|1|D2|G|498
9TKP|1|D2|U|499
9TKP|1|D2|G|500
9TKP|1|D2|A|501
9TKP|1|D2|A|502
9TKP|1|D2|A|503
9TKP|1|D2|A|504
9TKP|1|D2|A|505
9TKP|1|D2|G|506
9TKP|1|D2|A|507
9TKP|1|D2|A|508
9TKP|1|D2|C|509

Current chains

Chain D2
23S Ribosomal RNA

Nearby chains

Chain BV
Large ribosomal subunit protein uL22
Chain BX
Large ribosomal subunit protein uL24

Coloring options:

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