IL_9TKP_080

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

9TKP|1|D2|G|801, 9TKP|1|D2|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|G|674
9TKP|1|D2|A|675
9TKP|1|D2|A|676
9TKP|1|D2|A|677
9TKP|1|D2|C|678
*
9TKP|1|D2|G|799
9TKP|1|D2|A|800
9TKP|1|D2|G|801
9TKP|1|D2|A|802
9TKP|1|D2|U|803
9TKP|1|D2|A|804
9TKP|1|D2|G|805
9TKP|1|D2|C|806

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BD

Large ribosomal subunit protein uL4

Chain BO

Large ribosomal subunit protein uL15