IL_9TKP_110

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUAAGUAA*UGAAAUU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|A|1262
9TKP|1|D2|U|1263
9TKP|1|D2|A|1264
9TKP|1|D2|A|1265
9TKP|1|D2|G|1266
9TKP|1|D2|U|1267
9TKP|1|D2|A|1268
9TKP|1|D2|A|1269
*
9TKP|1|D2|U|2011
9TKP|1|D2|G|2012
9TKP|1|D2|A|2013
9TKP|1|D2|A|2014
9TKP|1|D2|A|2015
9TKP|1|D2|U|2016
9TKP|1|D2|U|2017

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B5

Large ribosomal subunit protein bL32

Chain BD

Large ribosomal subunit protein uL4

Chain BV

Large ribosomal subunit protein uL22