IL_9TKP_135

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGCAAAC*GGACGUAUA

Length

16 nucleotides

Bulged bases

9TKP|1|D2|A|1801, 9TKP|1|D2|C|1816, 9TKP|1|D2|U|1820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|U|1798
9TKP|1|D2|G|1799
9TKP|1|D2|C|1800
9TKP|1|D2|A|1801
9TKP|1|D2|A|1802
9TKP|1|D2|A|1803
9TKP|1|D2|C|1804
*
9TKP|1|D2|G|1813
9TKP|1|D2|G|1814
9TKP|1|D2|A|1815
9TKP|1|D2|C|1816
9TKP|1|D2|G|1817
9TKP|1|D2|U|1818
9TKP|1|D2|A|1819
9TKP|1|D2|U|1820
9TKP|1|D2|A|1821

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL2

Chain D1

Small subunit ribosomal RNA; SSU rRNA