IL_9TKP_150

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUGUGUAGGAUAG*CCUU

Length

17 nucleotides

Bulged bases

9TKP|1|D2|U|2111, 9TKP|1|D2|G|2112, 9TKP|1|D2|G|2116, 9TKP|1|D2|A|2117, 9TKP|1|D2|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|A|2108
9TKP|1|D2|U|2109
9TKP|1|D2|G|2110
9TKP|1|D2|U|2111
9TKP|1|D2|G|2112
9TKP|1|D2|U|2113
9TKP|1|D2|A|2114
9TKP|1|D2|G|2115
9TKP|1|D2|G|2116
9TKP|1|D2|A|2117
9TKP|1|D2|U|2118
9TKP|1|D2|A|2119
9TKP|1|D2|G|2120
*
9TKP|1|D2|C|2178
9TKP|1|D2|C|2179
9TKP|1|D2|U|2180
9TKP|1|D2|U|2181

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BA

Large ribosomal subunit protein uL1