IL_9TKP_179

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAUGGUAG*CGAGAGUAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D3|C|71
9TKP|1|D3|G|72
9TKP|1|D3|A|73
9TKP|1|D3|U|74
9TKP|1|D3|G|75
9TKP|1|D3|G|76
9TKP|1|D3|U|77
9TKP|1|D3|A|78
9TKP|1|D3|G|79
*
9TKP|1|D3|C|97
9TKP|1|D3|G|98
9TKP|1|D3|A|99
9TKP|1|D3|G|100
9TKP|1|D3|A|101
9TKP|1|D3|G|102
9TKP|1|D3|U|103
9TKP|1|D3|A|104
9TKP|1|D3|G|105

Current chains

Chain D3

5S Ribosomal RNA

Nearby chains

Chain BP

50S ribosomal protein L16

Chain BY

Large ribosomal subunit protein bL25

Chain D2

Large subunit ribosomal RNA; LSU rRNA