IL_9TKQ_021

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D1|U|409
9TKQ|1|D1|G|410
9TKQ|1|D1|A|411
9TKQ|1|D1|A|412
9TKQ|1|D1|G|413
9TKQ|1|D1|A|414
9TKQ|1|D1|A|415
9TKQ|1|D1|G|416
*
9TKQ|1|D1|U|427
9TKQ|1|D1|G|428
9TKQ|1|D1|U|429
9TKQ|1|D1|A|430
9TKQ|1|D1|A|431
9TKQ|1|D1|A|432
9TKQ|1|D1|G|433

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AC

Small ribosomal subunit protein uS4