IL_9TKQ_047

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGUU*AAUGUGCCUUCGGGAAC

Length

23 nucleotides

Bulged bases

9TKQ|1|D1|U|1030, 9TKQ|1|D1|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D1|G|1003
9TKQ|1|D1|A|1004
9TKQ|1|D1|A|1005
9TKQ|1|D1|G|1006
9TKQ|1|D1|U|1007
9TKQ|1|D1|U|1008
*
9TKQ|1|D1|A|1021
9TKQ|1|D1|A|1022
9TKQ|1|D1|U|1023
9TKQ|1|D1|G|1024
9TKQ|1|D1|U|1025
9TKQ|1|D1|G|1026
9TKQ|1|D1|C|1027
9TKQ|1|D1|C|1028
9TKQ|1|D1|U|1029
9TKQ|1|D1|U|1030
9TKQ|1|D1|C|1031
9TKQ|1|D1|G|1032
9TKQ|1|D1|G|1033
9TKQ|1|D1|G|1034
9TKQ|1|D1|A|1035
9TKQ|1|D1|A|1036
9TKQ|1|D1|C|1037

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AM

Small ribosomal subunit protein uS14