3D structure

PDB id
9TKQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GUC*GUC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TKQ|1|D1|G|1061
9TKQ|1|D1|U|1062
9TKQ|1|D1|C|1063
*
9TKQ|1|D1|G|1193
9TKQ|1|D1|U|1194
9TKQ|1|D1|C|1195

Current chains

Chain D1
16S Ribosomal RNA

Nearby chains

Chain AB
Small ribosomal subunit protein uS3
Chain AD
Small ribosomal subunit protein uS5
Chain AH
Small ribosomal subunit protein uS9
Chain AI
Small ribosomal subunit protein uS10
Chain AM
Small ribosomal subunit protein uS14

Coloring options:

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