IL_9TKQ_061

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D1|G|1401
9TKQ|1|D1|C|1402
9TKQ|1|D1|C|1403
9TKQ|1|D1|C|1404
*
9TKQ|1|D1|G|1497
9TKQ|1|D1|U|1498
9TKQ|1|D1|A|1499
9TKQ|1|D1|A|1500
9TKQ|1|D1|C|1501

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain D2

Large subunit ribosomal RNA; LSU rRNA

Chain D4

mRNA

Chain D5

Transfer RNA; tRNA