IL_9TKQ_105
3D structure
- PDB id
- 9TKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGAAAC*GGAAGAUGUAACGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 9TKQ|1|D2|A|1127, 9TKQ|1|D2|U|1130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKQ|1|D2|G|1024
9TKQ|1|D2|G|1025
9TKQ|1|D2|G|1026
9TKQ|1|D2|A|1027
9TKQ|1|D2|A|1028
9TKQ|1|D2|A|1029
9TKQ|1|D2|C|1030
*
9TKQ|1|D2|G|1124
9TKQ|1|D2|G|1125
9TKQ|1|D2|A|1126
9TKQ|1|D2|A|1127
9TKQ|1|D2|G|1128
9TKQ|1|D2|A|1129
9TKQ|1|D2|U|1130
9TKQ|1|D2|G|1131
9TKQ|1|D2|U|1132
9TKQ|1|D2|A|1133
9TKQ|1|D2|A|1134
9TKQ|1|D2|C|1135
9TKQ|1|D2|G|1136
9TKQ|1|D2|G|1137
9TKQ|1|D2|G|1138
9TKQ|1|D2|G|1139
9TKQ|1|D2|C|1140
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain B9
- Large ribosomal subunit protein bL36A
- Chain BC
- 50S ribosomal protein L3
- Chain BM
- Large ribosomal subunit protein uL13
- Chain BP
- 50S ribosomal protein L16
- Chain D3
- 5S ribosomal RNA; 5S rRNA
Coloring options: