IL_9TKQ_108

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCCAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

9TKQ|1|D2|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|C|1043
9TKQ|1|D2|C|1044
9TKQ|1|D2|C|1045
9TKQ|1|D2|A|1046
9TKQ|1|D2|G|1047
9TKQ|1|D2|A|1048
9TKQ|1|D2|C|1049
9TKQ|1|D2|A|1050
9TKQ|1|D2|G|1051
*
9TKQ|1|D2|U|1108
9TKQ|1|D2|C|1109
9TKQ|1|D2|G|1110
9TKQ|1|D2|A|1111
9TKQ|1|D2|G|1112

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B9

Large ribosomal subunit protein bL36A

Chain BF

Large ribosomal subunit protein uL6