IL_9TKQ_114

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUAAGUAA*UGAAAUU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|A|1262
9TKQ|1|D2|U|1263
9TKQ|1|D2|A|1264
9TKQ|1|D2|A|1265
9TKQ|1|D2|G|1266
9TKQ|1|D2|U|1267
9TKQ|1|D2|A|1268
9TKQ|1|D2|A|1269
*
9TKQ|1|D2|U|2011
9TKQ|1|D2|G|2012
9TKQ|1|D2|A|2013
9TKQ|1|D2|A|2014
9TKQ|1|D2|A|2015
9TKQ|1|D2|U|2016
9TKQ|1|D2|U|2017

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B5

Large ribosomal subunit protein bL32

Chain BD

Large ribosomal subunit protein uL4

Chain BV

Large ribosomal subunit protein uL22