IL_9TKQ_143

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|U|1851
9TKQ|1|D2|U|1852
9TKQ|1|D2|A|1853
9TKQ|1|D2|A|1854
9TKQ|1|D2|U|1855
9TKQ|1|D2|U|1856
9TKQ|1|D2|G|1857
9TKQ|1|D2|A|1858
9TKQ|1|D2|U|1859
9TKQ|1|D2|G|1860
*
9TKQ|1|D2|U|1882
9TKQ|1|D2|U|1883
9TKQ|1|D2|G|1884
9TKQ|1|D2|A|1885
9TKQ|1|D2|U|1886
9TKQ|1|D2|C|1887
9TKQ|1|D2|G|1888
9TKQ|1|D2|A|1889
9TKQ|1|D2|A|1890
9TKQ|1|D2|G|1891

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BA

Large ribosomal subunit protein uL1