IL_9TKQ_171

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGAG*CGAGAUGAG

Length

14 nucleotides

Bulged bases

9TKQ|1|D2|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|C|2636
9TKQ|1|D2|U|2637
9TKQ|1|D2|G|2638
9TKQ|1|D2|A|2639
9TKQ|1|D2|G|2640
*
9TKQ|1|D2|C|2774
9TKQ|1|D2|G|2775
9TKQ|1|D2|A|2776
9TKQ|1|D2|G|2777
9TKQ|1|D2|A|2778
9TKQ|1|D2|U|2779
9TKQ|1|D2|G|2780
9TKQ|1|D2|A|2781
9TKQ|1|D2|G|2782

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L3

Chain BM

Large ribosomal subunit protein uL13