IL_9TKQ_172

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAGUAC*GGACCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|C|2652
9TKQ|1|D2|U|2653
9TKQ|1|D2|A|2654
9TKQ|1|D2|G|2655
9TKQ|1|D2|U|2656
9TKQ|1|D2|A|2657
9TKQ|1|D2|C|2658
*
9TKQ|1|D2|G|2663
9TKQ|1|D2|G|2664
9TKQ|1|D2|A|2665
9TKQ|1|D2|C|2666
9TKQ|1|D2|C|2667
9TKQ|1|D2|G|2668

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BF

Large ribosomal subunit protein uL6

Chain F2

Translation initiation factor IF-2