IL_9TKQ_174

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGUUC*GGUAG

Length

10 nucleotides

Bulged bases

9TKQ|1|D2|U|2689, 9TKQ|1|D2|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|U|2687
9TKQ|1|D2|G|2688
9TKQ|1|D2|U|2689
9TKQ|1|D2|U|2690
9TKQ|1|D2|C|2691
*
9TKQ|1|D2|G|2718
9TKQ|1|D2|G|2719
9TKQ|1|D2|U|2720
9TKQ|1|D2|A|2721
9TKQ|1|D2|G|2722

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L3

Chain BQ

Large ribosomal subunit protein bL17

Chain BS

Large ribosomal subunit protein bL19